PHYGE team
Integrated physiology and functional genomics of microbial systems
Understand the physiology of microorganisms
The PHYGE team’s research focuses on understanding microbial physiology under environmental constraints through an integrative approach. This approach combines methods and tools from quantitative physiology—including biochemical, molecular, and biophysical techniques—with those from biochemical engineering, such as bioreactor operation and nutritional strategies. The goal is to characterize microbial phenotypes under conditions relevant to intensive bioproduction.
Two major axes are addressed:
- Axe I: « “Understanding and engineering microbial cells for functional food, feed and health” focuses on understanding microbial physiology and interactions for functional foods and industrial biotechnology.
- Axe II: “Understanding cell heterogeneity for mastering robustness in bioproduction” aims at understanding cell heterogeneity to master the robustness of microbial strains under intensive bioproduction conditions.
The primary objective of these research activities is to generate scientific knowledge that can be leveraged in more applied projects in industrial biotechnology and human and animal health.
- Local : Pôles de TBI (PRISM ; Biocatalyse ; Génie des Procédés Durables ; Technologique) ; CRITT-BioIndustries ; Toulouse White Biotechnology
- Régional : CNES-CADMOS ; CRT-CATAR ; ICA-UMR CNRS 5312 ; Toxalim-UMR 1331 ; UCAI-UMR 1010 ; UMR SPO Montpellier
- National : ESPCI ; Institut Curie ; LCPO ; PNCA-UMR 914 ; PSAE-UMR 0210 ; SayFood-UMR 0782 ; IECB Bordeaux
- International: A*Star (Singapore) ; ACIB (Austria) ; Indian Institute of Science Bangalore ; NUS (Singapore) ; RWTH Aachen (Germany) ; TU Berlin (Germany) ; TU Graz (Austria) ; Universidade Nova de Lisboa (Portugal) ; University of Groningen (Netherland) ; Technische Universität Dresden Institut für Naturstofftechnik ; Technology and Innovation of KOBE University ; University of Liège-Gembloux Agro-Bio Tech Collaborations Industrielles : baCta Life ; (Erbi-BIO) Merck KGaA ; ESSI Tech ; EUROSAFE ; Lallemand Nutrition Animale
- Albane, Astier – Study of the dynamics of physiological states of cerevisiae under carotenoid production conditions controlled by optogenetics and assisted by online flow cytometry.
- Antoine, Boy – Étude des facteurs impactant la robustesse de souches génétiquement modifiées de Cupriavidus necator pour la production d’hydrocarbures en bioréacteur à partir de CO2.
- Alejandro, Ordonnez – Étude de la transition dimorphique de Yarrowia lipolytica dans des conditions de production de lipides : analyse quantitative de la distribution de sous-populations avec différents morphotypes et capacités d’accumulation.
- µO-PROT
- Collimator
- OptisFuel
- AstroPOU
- ConCO2rde
- PolyMorphoil
- Lallwall






