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Articles EAD8


Robles Rodriguez, C., Munoz Tamayo, R., Bideaux, C., Gorret, N., Guillouet, S., Molina-Jouve, C., Roux, G., Aceves-Lara, C. A. (2018). Modeling and optimization of lipid accumulation by Yarrowia lipolytica from glucose under nitrogen depletion conditions. Biotechnology and Bioengineering, 115 (5), 1137-1151. , DOI : 10.1002/bit.26537 http://prodinra.inra.fr/record/419552 IF=3,9

Crepin, L., Barthe, M., Leray, F., Guillouet, S. (2018). Alka(e)ne synthesis in Cupriavidus necator boosted by the expression of endogenous and heterologous ferredoxin-ferredoxin reductase systems. Biotechnology and Bioengineering, 115 (10), 2576-2584. , DOI : 10.1002/bit.26805 http://prodinra.inra.fr/record/451758 IF=2,8

Camarasa, C., Chiron, H., Daboussi, F., Della Valle, G., Dumas, C., Farines, V., Floury, J., Gagnaire, V. (Auteur de correspondance), Gorret, N., Léonil, J., Mouret, J.-R., O'Donohue, M. (Auteur de correspondance), Sablayrolles, J.-M., Salmon, J.-M., Saulnier, L., Truan, G. (2018). INRA's research in industrial biotechnology: For food, chemicals, materials and fuels. Innovative Food Science and Emerging Technologies, 46, 140-152. , DOI : 10.1016/j.ifset.2017.11.008 http://prodinra.inra.fr/record/429566 IF=3,1

Aceves Lara, C. A., Athes, V., Buche, P., Della Valle, G., Farines, V., Fonseca, F., Guillard, V., Kansou, K., Kristiawan, M., Monclus, V., Mouret, J.-R., Ndiaye, A., Neveu, P., Passot, S., Pénicaud, C., Sablayrolles, J.-M., Salmon, J.-M., Thomopoulos, R., Trelea, I.-C. (2018). The virtual food system: Innovative models and experiential feedback in technologies for winemaking, the cereals chain, food packaging and eco-designed starter production. Innovative Food Science and Emerging Technologies, 46, 54-64. , DOI : 10.1016/j.ifset.2017.10.006 http://prodinra.inra.fr/record/414193 IF=3,1

Sagnak, R., Cochot, S., Molina-Jouve, C., Nicaud, J.-M., Guillouet, S. (Auteur de correspondance) (2018). Modulation of the Glycerol Phosphate availability led to concomitant reduction in the citric acid excretion and increase in lipid content and yield in Yarrowia lipolytica. Journal of Biotechnology, 265, 40-45. , DOI : 10.1016/j.jbiotec.2017.11.001 http://prodinra.inra.fr/record/418697 IF=2,5

Xie, X. (Auteur de correspondance), Le Men, C., Dietrich, N., Schmitz, P., Fillaudeau, L. (2018). Local hydrodynamic investigation by PIV and CFD within a Dynamic filtration unit under laminar flow. Separation and Purification Technology, 198, 38-51. , DOI : 10.1016/j.seppur.2017.04.009 http://prodinra.inra.fr/record/428601 IF=3,9

Xie, X., Dietrich, N., Fillaudeau, L., Le Men, C., Schmitz, P., Line, A. (Auteur de correspondance) (2018). Local hydrodynamics investigation within a dynamic filtration unit under laminar flow. Chemical Engineering Research and Design, 132, 954-965. , DOI : 10.1016/j.cherd.2018.02.018 http://prodinra.inra.fr/record/428602 IF=2,8

Timoumi, A., Guillouet, S., Molina-Jouve, C., Fillaudeau, L., Gorret, N. (Auteur de correspondance) (2018). Impacts of environmental conditions on product formation and morphology of Yarrowia lipolytica. Applied Microbiology and Biotechnology, 102 (9), 3831-3848. , DOI : 10.1007/s00253-018-8870-3 http://prodinra.inra.fr/record/427938 IF=3,3

El Rayess Y, Devatine A, Albasi C, Fillaudeau L. (2018). La filtration dynamique: Un nouveau concept pour la filtration des vins chargés en particules. Articles Techniques - Revue des Œnologues 167:26-29.



Timoumi A, Bideaux C, Guillouet SE, Allouche Y, Molina-Jouve C, Fillaudeau L, Gorret N (2017). Influence of oxygen availability on the metabolism and morphology of Yarrowia lipolytica: insights into the impact of glucose levels on dimorphism. Appl Microbiol Biotechnol doi:10.1007/s00253-017-8446-7


Sydow A, Pannek A, Krieg T, Huth I, Guillouet SE, Holtmann D (2017)  Expanding the genetic tool box for Cupriavidus necator by a stabilized L-rhamnose inducible plasmid system. Journal of Biotechnology doi:https://doi.org/10.1016/j.jbiotec.2017.10.002


Robles-Rodriguez CE, Bideaux C, Guillouet SE, Gorret N, Cescut J, Uribelarrea J-L, Molina-Jouve C, Roux G, Aceves-Lara CA (2017) Dynamic metabolic modeling of lipid accumulation and citric acid production by Yarrowia lipolytica. Computers & Chemical Engineering doi:http://dx.doi.org/10.1016/j.compchemeng.2017.02.013


Marc J, Grousseau E, Lombard E, Sinskey AJ, Gorret N, Guillouet SE (2017). Over expression of GroESL in Cupriavidus necator for heterotrophic and autotrophic isopropanol production. Metab Eng 42:74-84 doi:10.1016/j.ymben.2017.05.007


Andin N, Longieras A, Veronese T, Marcato F, Molina-Jouve C, Uribelarrea J-L (2017). Improving carbon and energy distribution by coupling growth and medium chain length polyhydroxyalkanoate production from fatty acids by Pseudomonas putida KT2440. Biotechnology and Bioprocess Engineering 22(3):308-318 doi:10.1007/s12257-016-0449-1


Camarasa C, Chiron H, Daboussi F, Della Valle G, Dumas C, Farines V, Floury J, Gagnaire V, Gorret N, Leonil J, Mouret J-R, O'Donohue MJ, Sablayrolles J-M, Salmon J-M, Saulnier L, Truan G (2017)  INRA's research in industrial biotechnology: For food, chemicals, materials and fuels. Innovative Food Science & Emerging Technologies doi:https://doi.org/10.1016/j.ifset.2017.11.008


Aceves Lara CA, Athès V, Buche P, Della Valle G, Farines V, Fonseca F, Guillard V, Kansou K, Kristiawan M, Monclus V, Mouret J-R, Ndiaye A, Neveu P, Passot S, Pénicaud C, Sablayrolles J-M, Salmon J-M, Thomopoulos R, Trelea IC (2017). The virtual food system: Innovative models and experiential feedback in technologies for winemaking, the cereals chain, food packaging and eco-designed starter production. Innovative Food Science & Emerging Technologies doi:https://doi.org/10.1016/j.ifset.2017.10.006


Meneghel J, Passot S, Cenard S, Refregiers M, Jamme F, Fonseca F (2017). Subcellular membrane fluidity of Lactobacillus delbrueckii subsp. bulgaricus under cold and osmotic stress. Appl Microbiol Biotechnol 101(18):6907-6917 doi:10.1007/s00253-017-8444-9




Alfenore S, Molina-Jouve C (2016). Special Issue "Bioenergies, Present and Prospects" Foreword. Process Biochemistry 51(11):1745-1746 doi:10.1016/j.procbio.2016.10.019


Alfenore S, Molina-Jouve C (2016). Current status and future prospects of conversion of lignocellulosic resources to biofuels using yeasts and bacteria. Review Article. Process Biochemistry 51(11) 1747-1756 doi:10.1016/j.procbio.2016.07.028


Timoumi A, Cléret M, Bideaux C, Guillouet SE, Allouche Y, Molina-Jouve C, Fillaudeau L, Gorret N (2016). Dynamic behavior of Yarrowia lipolytica in response to pH perturbations: dependence of the stress response on the culture mode. Applied Microbiology and Biotechnology:1-16 doi:10.1007/s00253-016-7856-2


El Rayess Y, Manon Y, Jitariouk N, Albasi C, Peuchot MM, Devatine A, Fillaudeau L (2016). Wine clarification with Rotating and Vibrating Filtration (RVF): Investigation of the impact of membrane material, wine composition and operating conditions.Journal of Membrane Science 513:47-57 doi:10.1016/j.memsci.2016.03.058


Crepin L, Lombard E, Guillouet SE (2016). Metabolic engineering of Cupriavidus necator for heterotrophic and autotrophic alka(e)ne production. Metabolic Engineering 37:92-101 doi:10.1016/j.ymben.2016.05.002


Cavaille L, Albuquerque M, Grousseau E, Lepeuple AS, Uribelarrea JL, Hernandez-Raquet G, Paul E (2016). Understanding of polyhydroxybutyrate production under carbon and phosphorus-limited growth conditions in non-axenic continuous culture. Bioresource Technology 201:65-73 doi:10.1016/j.biortech.2015.11.003


Bideaux C, Montheard J, Cameleyre X, Molina-Jouve C, Alfenore S (2016). Metabolic flux analysis model for optimizing xylose conversion into ethanol by the natural C5-fermenting yeast Candida shehatae. Applied Microbiology and Biotechnology 100(3):1489-1499 doi:10.1007/s00253-015-7085-0



Hajjaj H, Goma G, Francois JM (2015). Effect of the cultivation mode on red pigments production from Monascus ruber. Int J Food Sci Technol 50(8):1731-1736 doi:10.1111/ijfs.12803


Grunwald S, Mottet A, Grousseau E, Plassmeier JK, Popovic MK, Uribelarrea JL, Gorret N, Guillouet SE, Sinskey A (2015). Kinetic and stoichiometric characterization of organoautotrophic growth of Ralstonia eutropha on formic acid in fed-batch and continuous cultures.Microbial Biotechnology 8(1):155-163 doi:10.1111/1751-7915.12149


Froissard M, Canonge M, Pouteaux M, Cintrat B, Mohand-Oumoussa S, Guillouet SE, Chardot T, Jacques N, Casaregola S (2015). Lipids containing medium-chain fatty acids are specific to post-whole genome duplication Saccharomycotina yeasts. BMC Evol Biol 15 doi:10.1186/s12862-015-0369-2


Bornot J, Molina-Jouve C, Uribelarrea JL, Gorret N (2015). Quantitative Characterization of the Growth of Deinococcus geothermalis DSM-11302: Effect of Inoculum Size, Growth Medium and Culture Conditions. Microorganisms 3:441-463 doi:10.3390/microorganisms30x000x




L. Richard,  S. E. Guillouet, J.-L. Uribelarrea (2014) Quantification of the transient and long-term response of Saccharomyces cerevisiae to carbon dioxide stresses of various intensities. Process Biochemistry. Sous Presse.

Bornot J, Aceves-Lara C. A., Molina-Jouve C., Uribelarrea J. L., Gorret N. (2014) Experimental and statistical analysis of nutritional requirements for the growth of the extremophile Deinococcus geothermalis DSM 11300. Extremophiles. Sous presse .


Grunwald S., Mottet A., Grousseau E., Popović M. K., Uribelarrea J. L., Gorret N., Guillouet S.E., Sinskey A. (2014) Kinetic and stoichiometric characterization of organoautotrophic growth of Ralstonia eutropha on formic acid in fed-batch and continuous cultures. Microbial Biotechnology.  Sous presse. DOI: 10.1111/1751-7915.12149


E. Grousseau, J. Lu, N. Gorret, S.E. Guillouet andA. J. Sinskey (2014) Isopropanol production with engineered Cupriavidus necator as bioproduction platform. Appl Microbiol Biotechnol. 98, 4277-4290;


A. Ochoa-Estopier and S. E. Guillouet (2014) D-stat culture for studying the metabolic shifts from oxidativemetabolism to lipid accumulation and citric acid production inYarrowia lipolytica. J. Biotechnol. 170, 35– 41

Bornot, J., Molina-Jouve, C., Uribelarrea, J.-L. and Gorret, N., (2014) Growth of the extremophilic Deinococcus geothermalis DSM 11302 using co-substrate fed-batch culture. Appl. Microbiol. Biotechnol., 98(3), 1281-1290


Grousseau, E., E. Blanchet, S. Déléris, M. G. E. Albuquerque, E. Paul and J.-L. Uribelarrea (2014) Phosphorus limitation strategy to increase propionic acid flux towards 3-Hydroxyvaleric acid monomers in Cupriavidus necator. Bioresource Technol. 153, 206-215


Aguilar-Garnica E, Silva-Romero YE, Hernandez-Montelongo R, Garcia-Sandoval JP, Aceves-Lara CA (2014). Kinetic analysis for the esterification of high free fatty acid feedstocks with a structural identifiability approach. Eur J Lipid Sci Technol 116(11):1598-1607 doi:10.1002/ejlt.201400059



Babau, M., Cescut, J., Allouche, Y., Lombaert-Valot, I., Fillaudeau, L., Uribelarrea, J.L., Molina-Jouve, C., (2013) Towards a Microbial Production of Fatty Acids as Precursors of Biokerosene from Glucose and Xylose. Oil Gas Sci. Technol. 68 (5), 899-911


A. Ochoa-Estopier and S. E. Guillouet (2014) D-stat culture for studying the metabolic shifts from oxidativemetabolism to lipid accumulation and citric acid production inYarrowia lipolytica. J. Biotechnol. 170 (2014) 35– 41 (IF 3.184)


Bornot., J., C. Molina-Jouve, J.L. Uribelarrea and Gorret N.. (2013) Growth of the extremophilic Deinococcus  geothermalis DSM 11302 using co-substrate fed-batch culture". Accepted in Appl Microbiol Biotechnol. (IF 3.689)


Cavaillé, L., E. Grousseau, M. Pocquet, A.-S. Lepeuple, J.L. Uribelarrea,
G. Hernandez-Raquet and E. Paul (2013) Polyhydroxybutyrate production by direct use of waste activated sludge in phosphorus-limited fed-batch culture, Bioresour. Technol.  149, 301-309 (IF 4.98).


Grousseau, E., E. Blanchet, S. Deleris, M. G. E. Albuquerque, E. Paul and J.-L. Uribelarrea (2013) Impact of sustaining a controlled residual growth on polyhydroxybutyrate yield and production kinetics in Cupriavidus necator, Bioresour. Technol. 148, 30-38 (IF 4.98).


J. Marc, D. Feria-Gervasio, J. R. Mouret and S. E. Guillouet (2013) Impact of oleic acid as co-substrate of glucose on “short” and “long-term” Crabtree effect in Saccharomyces cerevisiae. Microb Cell Fact. (2013) 12:83 (IF 3.55).


Pagliardini J , Hubmann G. , Alfenore S., Nevoigt E., Bideaux C.,Guillouet S.E. The metabolic costs of improving ethanol yield by reducing glycerol formation capacity under anaerobic conditions in Saccharomyces cerevisiae. Microb Cell Fact. (2013) 12:29 (IF 3.55)


L. Soussan, C. Guigui, C. Mathe, S. Alfenore and C. Cabassud. Enzyme-labeled phages detected by amperometry: A new method to study inline virus retention in membrane processes. AIChE Journal (2013) 59 (1), 68–78.


J. Crattelet, S. Ghnimi, P. Debreyne, I. Zaid, A. Boukabache, D. Esteve, L. Auret and L. Fillaudeau
On-line local thermal pulse analysis sensor to monitor fouling and cleaning: Application to dairy product pasteurisation with an ohmic cell jet heater.
Journal of Food Engineering (2013) ( http://dx.doi.org/10.1016/j.jfoodeng.2013.05.009 )


Lamia Ben Gaïda, Christophe Andre, Carine Bideaux, Sandrine Alfenore, Xavier Cameleyre, Carole Molina-Jouve and Luc Fillaudeau. Bioperformance interpretation of a two-stage membrane bioreactor with cell recycling for intensive microbial production using residence time and internal age distributions. Process Biochemistry, vol. 48 issue 1 January, 2013. p. 13-24, ( http://dx.doi.org/10.1016/j.procbio.2012.10.015)


Sunya, S., Bideaux, C., Molina-Jouve C., Gorret, N. Short-term dynamic behavior of Escherichia coli in response to successive glucose pulses on glucose-limited chemostat cultures. Journal of Biotechnology (2013). In press


Mohammad Amin Kazemi, Mohammad Soltanieh, Mehdi Yazdanshenas, Luc Fillaudeau. Influence of Crossflow Microfiltration on Ceramic Membrane Fouling and Beer Quality, Desalination and Water Treatment (DWT), 1-11, 2013 ( Doi: 10.1080/19443994.2013.769660).


Tien-Cuong NGUYEN, Dominique ANNE-ARCHARD, Véronique COMA, Xavier CAMELEYRE, Eric LOMBARD, Cédric BINET, Arthur NOUHEN, Kim-Anh TO and Luc FILLAUDEAU. In-situ rheometry of concentrated cellulose fibre suspensions and relationships with enzymatic hydrolysis. Bioressource Technology. Bioresource Technology, BITE11274, DOI: 10.1016/j.biortech.2013.01.110. 2013



Ben Gaida L., Andre C., Bideaux C, Alfenore S, Cameleyre X, Molina-Jouve C, Luc Fillaudeau, Modelling of hydrodynamic behaviour of a two-stage bioreactor with cell recycling dedicated to intensive microbial production. Chem. Eng. J., Volume 183, 15 February 2012, Pages 222-230.


Brognaux, A., Neubauer, P., Twizere, J. P., Francis, F., Gorret, N., Thonart, P., Frank Delvigne, F. Direct and indirect use of GFP whole cell biosensors for the assessment of bioprocess performances: design of milliliter scale-down bioreactors. Biotechnol Prog. 2012 Nov 1. doi: 10.1002/btpr.1660.


Montheard J., Garcier S., Lombard E., Cameleyre X., Guillouet S., Molina-Jouve C., Alfenore S. Assessment of Candida shehatae viability by flow cytometry and fluorescent probes. J. Microbiol. Methods. (2012).91, 8-13.


Amillastre E., Aceves-Lara C., Uribelarrea J-L, Alfenore S, Guillouet S.E. .Dynamic model of temperature impact on cell viability and major product formation during fed-batch and continuous ethanolic fermentation in Saccharomyces cerevisiae. Bioresource Technology 117  (2012), pp. 242-250.


Aceves-Lara C.-A., Latrille Eric , Conte T. and Steyer Jean-Philippe
Online estimation of VFA, alkalinity and bicarbonate concentrations by electrical conductivity measurement during anaerobic fermentation - Water Science & Technology (IF 1.12)  65(7) pp 1281–1289




Sunya, S., Delvigne, F., Uribelarrea, J. L., Molina-Jouve C., Gorret, N (2012). Comparison of the Transient Responses of Escherichia coli to a Glucose Pulse of Various Intensities. Applied Microbiology and Biotechnology (IF 3.42) 95 (4  ) pp 1021-1034


Beaufort S., Da Silva T., Lafforgue C., Alfenore S. (2012), Fluorescent proteins as in-vivo and in-situ reporters to study the development of a Saccharomyces cerevisiae yeast biofilm and its invasion by the bacteria Escherichia coli. In Press in FEMS Microbiology Ecology


Gorret, N., Sunya, S., Delvigne, F., Uribelarrea, J. L., Molina-Jouve C. (2012). Real-time monitoring of metabolic shift and transcriptional induction of yciG::luxCDABE E.coli reporter strain to a glucose pulse of different concentrations. J. Biotechnol. 157 (3), 379- 390


Aguilar-Garnica E., García-Sandoval J. P., Aceves-Lara C. A., Escalante F. M. E.(2012),An asymptotic observer-based monitoring scheme for a class of plug flow reactors. Water Science & Technology 65(2) 205–213




J. Cescut, E.Severac, C; Molina-Jouve, J.L. Uribelarrea (2011). J. Chromatography A(IF=4.1) 1218 (3), 373-379. Optimizing pressurized liquid extraction ofmicrobial lipids using the response surface method.


Ochoa-Estopier A., Lesage J., Gorret N., Guillouet S.E. (2011). Bioresour.Technol(IF 4.253) 102 (2), 1521-1527. Kinetic analysisof a Saccharomyces cerevisiae strainadapted for improved growth on glycerol: Implications for the development ofyeast bioprocesses on glycerol.


S.Beaufort, S. Alfenore, C.Lafforgue (2011) Use of fluorescent microorganisms to perform in vivo and insitu local characterization of microbial deposits. J.Membrane Sc. 369 (1-2), 30-39 (IF = 3.203)


Kerfai S,Fernandez A, Mathe S, Alfenore S.,Arlabosse P. (2011). Chem Eng J (IF 2.816) 167(1) 132-139. Production of green juice with an intensive thermo-mechanicalfractionation process. Part II: Effect of processing conditions on the liquidfraction properties.


Delvigne F., A.Brognaux, N. Gorret, P. Neubauer, A. Delafosse, M. L. Collignon, D. Toye, M.Crine, M. Boxus & P. Thonart (2011). In Press in Bioch. Eng.J. (IF 2.193). Characterization of the response of GFP microbialbiosensors sensitive to substrate limitation in scale-downbioreactors.


Delvigne, F., A.Brognaux, F. Francis, J. C. Twizere, N.Gorret, S. Sorensen, P. Thonart (2011) in press in Biotechnology Journal.Green Fluorescent Protein (GFP)leakage from microbial biosensors : useful information for the estimation ofthe scale-down effect.


Manon Y., Uribelarrea J.L., Molina-Jouve C., Anne-Archard D., Fillaudeau L., Identification of physical and biological interactions in cell cultures in a birreactor: On-line and off-line rheological characterization. Applied Rheology, 21:3, 35167, 2011.


Crattelet J., Fillaudeau L., Auret L., Salvagnac L., Boukabache A, Estève D. Micro-capteur pour la mesure en ligne et en continu de l’encrassement dans les procédés industriels et de traitement de l’eau : Réalisation et caractérisation du microsystème, Instrumentation, Mesure, Métrologie I2M, Revue des Systèmes I2M, DOI : 10.3166, vol.11, n°3.-4, 2011, 107-130.




M. Héry, H.Sanguin, S. Perez-Fabiel, X. Lefebvre, T.M. Vogel, E. Paul, S. Alfenore (2010). Water research (IF 4.355) 44(20), 6133-6143.Monitoring of bacterial communities during low temperature thermal treatment ofactivated sludge combining DNA phylochip and respiratory techniques.


Pagliardini J, Hubmann G, Bideaux C, Alfenore S, Nevoigt E, Guillouet SE. (2010)Microb CellFact. (IF 3.338) 9 (1): 36. Quantitative evaluation of yeast'srequirement for glycerol formation in very high ethanol performance fed-batchprocess.


Fromanger,R.; Guillouet, S E; Uribelarrea, J L; Molina-Jouve, C; Cameleyre, X.(2010) J Ind Microbiol Biotechnol(IF 1.919) 37 (5): 437-445. Effect of controlled oxygen limitation on Candida shehatae physiology for ethanolproduction from xylose and glucose.


M. Yazdanshenas, S. A. R. Tabatabaee Nezhad, M. Soltanieh, A. Tavakkoli, A. A Babaluo, L. Fillaudeau, Dead-End Microfiltration of Rough Non-Alcoholic Beer by Different Polymeric Membranes, J. Am. Soc. Brew. Chem. 68(2):83-88, 2010. doi:10.1094 /ASBCJ-2010-0315-01


Fillaudeau L., Crattelet J., Auret L., Fouling monitoring using differential thermal analyse under steady and periodic heat flow. Encyclopedia of Agricultural, Food and Biological Engineering, Second Edition (2011), Ed. Dennis R. Heldman, Marcel Dekker Inc., 270 Madison avenue, New York, NY 10016, DOI: 10.1081/E-EAFE2-120045933, 1-11, 2010.


Ben Gaïda L., André C., Bideaux C., Alfenore S., Cameleyre X, Molina-Jouve C, Fillaudeau L., Modélisation hydrodynamique d'un réacteur bi-étagé avec recyclage cellulaire (BBRC) à travers l'étude de la distribution des temps de séjour (DTS) des phases gaz, liquide et biomasse catalytique, Ind. Alim. Agri. 127 (03-04), 10-20, 2010.


M. Yazdanshenas, M. Soltanieh, S. A.R. Tabatabaee Nezhad, L. Fillaudeau, Cross-Flow Microfiltration of Rough Non-Alcoholic Beer and Diluted malt extract with Tubular Ceramic Membranes: investigation of fouling mechanisms, J. Mem.Sci. 362, 306-316, 2010.


Fillaudeau L., Yazdanshenas M., Clarification in brewing industry: opportunities and industrial reality. Récent Progrès en Génie des Procédés, MEMPRO-IV, 100, 2010, ISBN: 2-910239-74-8, Ed. SFGP, Paris, France, 9-17, 2010.



AthanasiosBeopoulos, Julien Cescut, RamdaneHaddouche, Jean-Louis Uribelarrea, Carole Molina-Jouve, Jean-Marc Nicaud. (2009)Progress in LipidResearch (IF 11.237), 48: 375-387Yarrowialipolytica as a model for bio-oil production


Sanchez-Gonzalez Y., Cameleyre X., Jouve-Molina C.,Goma G. & Alfenore S. (2009). Bioprocess and BiosystemsEngineering (IF 1.333) 32: 459-466. Dynamic microbial response under ethanol stress to monitor Saccharomycescerevisiae activity in different initial physiological states.


S. Beaufort, S. Alfenore, C. Lafforgue (2009) New Biotechnology (IF2.0) 25,208-209. Fluorescent microorganisms: a relevant tool to quantify therelationships between environmental conditions and 3D microbial organization inbiological aggregates.


Fillaudeau L., Ngyuen K., André C., Influence of flow regimes and heat power on residence time distribution in tubular Joule effect heater. J. Food Engineering, 95, 489-498, 2009.



D.Feria-Gervasio, J.R. Mouret, N. Gorret, G. Goma, S.E. Guillouet (2008) AppliedMicrobiol. Biotechnol (IF 2.596) 78: 319-331. Oleicacid delays and modulates the transition from respiratory to fermentative metabolismin Saccharomyces cerevisiae after exposure to glucose excess (Publisher’serratum, Applied Microbiol. Biotechnol 78: 377).


A. Popp,H.T.T. Nguyen, K. Boulahya, C. Bideaux,S. Alfenore, S. E. Guillouet, E. Nevoigt (2008). Biotechnol. Bioeng.(IF2.936) 100, 3: 497-505. Fermentative production of L-glycerol 3-phosphateutilizing a S. cerevisiae strain withengineered glycerol biosynthetic pathway


Fyferling, M., Uribelarrea, J.L., Goma, G.,Molina-Jouve, C. (2008) Bioprocess andBiosystems Engineering (IF1.333), 31: 595-604. Oxygentransfer in intensive microbial culture


Bideaux, C., Goma G., Uribelarrea, J. L.,Dahhou B., Roux, G. (2008). InternationalJournal of Modelling, Identification and Control IJMIC 3(4): 413-426.Stoichiometric modelling approach for microbial culture monitoring.


Fillaudeau L., Debreyne P., Ronse G., Guerin R., Doubrovine N., Bonnet B., Desmarest J., Crattelet J., Auret L., "Contrôle d'un encrassement laitier en procédé continu : comparaison de trois méthodes ", Ind. Alim. Agr., 125 (01-02), 12-21, 2008.



Legrand A., Berthou M., Fillaudeau L., "Characterization of solid-liquid suspensions (real, large and non-spherical particles in non newtonian carrier fluid) flowing in horizontal and vertical pipes", J. Food Engineering, 78, 2007, 345-355.


Fillaudeau L., Boissier B., Moreau A., Blanpain-Avet P., Ermolaev S., Jitariouk N., Gourdon A., "Investigation of rotating and vibrating filtration for clarification of rough beer", J. Food Engineering, 80, 2007, 206-217.


André C., Boissier B. and Fillaudeau L., "Residence time distribution in tubular Joule Effect Heaters with and without geometric modifications", J. Chem. Eng. Technol., 30, n°1, 1-9, 2007.


Legrand A., Leuliet J.C., Kesteloot R., Duquesne S., Fillaudeau L., " Physical, Mechanical, Thermal and Electrical properties of cooked red bean (Phaseolus Vulgaris L.) for continuous ohmic heating process", J. Food Engineering., 81, 2007, 447-458.


Fillaudeau L., Boissier B., Ermolaev S., Jitariouk N., Gourdon A., "Etude hydrodynamique d'un module de filtration dynamique", Ind. Alim. Agri., Septembre / Octobre, 124 (9), 8-16, 2007.



C. Bideaux, S. Alfenore, X. Cameleyre , C. Molina-Jouve, J.-L. Uribelarrea, S.E. Guillouet(2006). Applied and Environmental Microbiology (IF 3.801). 72 (3), 2134-2140. Minimization of glycerolproduction during the high performance fed-batch ethanolic fermentation processin Saccharomyces cerevisiae, using a metabolic model as prediction tool.


J.R. Mouret, J. Jacobsen,S.E. Guillouet (2006) Letters in AppliedMicrobiology (IF 1.679) 42, 363-368.Kinetic analysis of atrehalase-overexpressing strain grown on trehalose: a new tool forrespiro-fermentative transition studies in Saccharomyces cerevisiae.


F.Ben Chaabane, A.S. Aldiguier, S. Alfenore, X. Cameleyre, P.J. Blanc, C. Bideaux, S.E. Guillouet, G. Roux, C. Molina-Jouve (2006). Bioprocess and Biosystems Engineering. (IF 1.333) 29 (1), 49-57.Very high ethanolproductivity in an innovative continuous two-stage bioreactor with cellrecycle.


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Fillaudeau L., Leuliet J.C., Tissier J.P., Maury V., Semet F., Debreyne P., Berthou M., Chopard F., "Étude de l'encrassement lors du traitement thermique du lait entier par effet Joule Direct", Ind. Alim. Agr., 123(09), 26-35, 2006.


Fillaudeau L., Blanpain-Avet P., Daufin G., "Water, wastewater and waste management in brewing industries", J. Cleaner Production, 14, 2006, 463-471.


Legrand A., Berthou M., Fillaudeau L., "Analyse de la distribution cumulée en particules dans des conduits cylindriques: application à l'écoulement de suspensions agroalimentaires solides – liquides", Ind. Agr. Alim., Janvier/Février, 123, 2006, 7-15.


Fillaudeau L., Winterton P., Leuliet J.C., Tissier J.P., Maury V., Semet F., Debreyne P., Berthou M., Chopard F., "Heat treatment of whole milk by direct Joule effect – Experimental and numerical approaches to fouling phenomena", J. Dairy Science, 89, 2006, 4475-4489.



Colombie V, Bideaux C,Uribelarrea J.L., Goma G. (2005) The effect of glucose feeding andvariation in biomass on spiramycin production by Streptomyces ambofaciens Bioprocess and Biosystems Engineering(IF 1.333), 28(1), 55-61.